Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015903523.1_cds_XP_016453625.1_47732
CDS Infomation

[gene=LOC107777965] [db_xref=GeneID:107777965] [protein=rhodanese-like domain-containing protein 4, chloroplastic] [protein_id=XP_016453625.1] [location=complement(join(36590..36637,36946..37134,37564..37716,37857..37937,38499..38573,38653..38727,39440..39526,39609..39711,40551..41185))] [gbkey=CDS]
Sequence

ATGGAGGCTCTCAATGCAGCAAGTTTGACACCTCTTTCAGTTTTTTCTGATAGAAGAAAT
GAACCCAAAAAAATCCCATTCAAGAACCTTTCAAATTCAGCCAATTTTAGCACCAATTCA
TCAAATTCACTAGAGATTCTATCAAGAAAAGTTCAAGGGGGTCTAGTAGTACTTTCCTCA
GTTTTCACTACAAGTTTAGCTAATGCATTAACATATGAAGAGGCACTTCAGCAATCAACT
ACTAGTACTTCAACAGCTGATTTTGATGCAAATGCCTTTGTTGAAACTGTGACAAATTTT
GTATCTGAAAATCCTTTAGTCATAGCTGGTGGTTTTGCTATTTTGGCTTTGCCATTGGTT
CTGTCTCAGGTGCTTGGTAATAATAAGCCTAATAAGAAATGGGGTGTTGAGTCTGCTAAA
AAAGCTTATGCTGAATTGGGAGATGATGAGAGTTCAGAATTACTTGATATAAGGGGACCT
GTGGAATTGAGGCAAGTGGGAAGTCCAGATATAAGGGGTTTGAAGAAGAAGGCAGTTTCA
GTTGTTTATAAAGGTGAAGATAAGCCAGGGTTCTTAAAGAAGCTAGCTTTGAGGTTCAAG
GAGCCAGAGAATACTACATTGTTCATTCTAGACAAATTTGATGGGAACTCTGAATTGGTA
GCGGAGCTTGTCACAGCTAATGGTTTTAAAGCTGCATATGCAATTAAAGATGGCGCTGAA
GGACCGCGAGGATGGAAGAATAGTGGCCTTCCTTGGATACTTCCGAGGAAAACATTAAGT
CTTGATCTCGGCAATCTGTCTGATGCTCTTGATGGTGTTCTTGGGGATGGTTCTGATGCT
GTTGCAGTAGGTTTAGGTGTAGCTGCAGCTGCCGGGTTAGGATTTTTGGCGTTCACAGAG
GTAGAAACGATTCTCCAACTGTTAGGCTCAGCTGCACTTATCCAACTGGTCAGCACGAAA
CTTCTATTTGCAGAGGACAGAAAGCAAACTCTGCAACAAGTTGATGAGTTCGTCACCACC
AACATTGCTCCAAAGGAGCTTGCAGGTGATATTAAGCAAATAGGGATGGCTCTTCTTCCG
ACGCCCGTGACTAGCAAGGCTCTACCTGCAGCTGCAGAGACAACTCCAGAAATCAATTCA
GTCCCTAAACCAGAAATCAAAGTAGAAGCTCTAACTGGAATTTCAAAGCCACTTTCACCA
TATCCTAGTTATCCTGATCTCAAGCCTCCAACATCGCCGATGCCTTCACAACCTAGTGGC
GGTGCGGAGAAAACTGAAACAGTTTCCAAGGTAGAATTATCTGCTGAGTCTACTCTGGAA
ATCAATTCGGTCCCTAAACTAGAAGTCAAAGGAGAGGCACTAACTGGAAGTTCAAAGTCA
CTTTCTCCATATCCTAATTATCCTGATTTCAAGCCTCCAACATCACCAACGCCTTCACAA
GCATAA

Peptide Sequence

PEP ID

XP_016453625.1
PEP Infomation

PREDICTED: rhodanese-like domain-containing protein 4, chloroplastic [Nicotiana tabacum]
Sequence

MEALNAASLTPLSVFSDRRNEPKKIPFKNLSNSANFSTNSSNSLEILSRKVQGGLVVLSS
VFTTSLANALTYEEALQQSTTSTSTADFDANAFVETVTNFVSENPLVIAGGFAILALPLV
LSQVLGNNKPNKKWGVESAKKAYAELGDDESSELLDIRGPVELRQVGSPDIRGLKKKAVS
VVYKGEDKPGFLKKLALRFKEPENTTLFILDKFDGNSELVAELVTANGFKAAYAIKDGAE
GPRGWKNSGLPWILPRKTLSLDLGNLSDALDGVLGDGSDAVAVGLGVAAAAGLGFLAFTE
VETILQLLGSAALIQLVSTKLLFAEDRKQTLQQVDEFVTTNIAPKELAGDIKQIGMALLP
TPVTSKALPAAAETTPEINSVPKPEIKVEALTGISKPLSPYPSYPDLKPPTSPMPSQPSG
GAEKTETVSKVELSAESTLEINSVPKLEVKGEALTGSSKSLSPYPNYPDFKPPTSPTPSQ
A

Transcript Sequence

Gene sequence data has not been registered.